Phylum Amoebozoa Lühe, 1913
  
 Subphylum Conosa Cavalier-Smith, 1998
 see Infraphylum Conosa Cavalier-Smith, 1998
    
 Infraphylum Archamoebae Cavalier-Smith, 1983
 see Class Archamoebea Cavalier-Smith, 1983
      
 Class Archamoebea Cavalier-Smith, 1983
        
 1 Order Pelobiontida Page, 1976
 see Order Rhizomastigida Doflein, 1916
        
 2 Order Mastigamoebida Frenzel, 1892
 see Order Rhizomastigida Doflein, 1916