eukaryotes
 see Domain Eukaryota Chatton, 1925
  
 Kingdom Protozoa Goldfuss, 1818 [paraphyletic] - protozoa
    
 Subkingdom Sarcomastigota Cavalier-Smith, 1983 [paraphyletic]
 see [unranked] dorsates Cavalier-Smith, 2021
      
 Infrakingdom Opizoa Cavalier-Smith, 2021 [paraphyletic]
        
 Phylum Choanozoa Cavalier-Smith, 1981 [paraphyletic]
          
 Subphylum Paramycia Cavalier-Smith, 2012 [sister group to excluded taxa] [monotypic]
 see Kingdom Nucleariae Tedersoo, Sánchez-Ramírez, Kõljalg, Bahram, Döring, Schigel, May, Ryberg & Abarenkov, 2018
            
 Class Cristidiscoidea Page, 1987
 see Kingdom Nucleariae Tedersoo, Sánchez-Ramírez, Kõljalg, Bahram, Döring, Schigel, May, Ryberg & Abarenkov, 2018
              
 Order Nucleariida Cavalier-Smith, 1993
                
 1 Genus Nuclearia Cienkowski, 1865
                
 2 Genus Vampyrellidium Zopf, 1885
                
 3 Family Pomphyolyxophryidae Cavalier-Smith, 2021, orth. inval.
 see Family Pompholyxophryidae Page, 1987
                
 4 Genus Lithocolla Schulze, 1874